BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B07LP1|AL429340
(527 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 998 0.0
>3x_Contig1619
Length = 7770
Score = 998 bits (500), Expect = 0.0
Identities = 517/526 (98%), Gaps = 2/526 (0%)
Strand = Plus / Minus
Query: 1 gtttataaattttattagtagatttaggtaaatcatataataaactattatcaggagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2247 gtttataaattttattagtagatttaggtaaatcatataataaactattatcaggagttc 2188
Query: 61 aatttaaaatagtatcttgaatagccttcattaaatcttccccgcggtctccccccgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2187 aatttaaaatagtatcttgaatagccttcattaaatcttccccgcggtctccccccgaag 2128
Query: 121 --aggagccgcgggtgaatttatatgttgagatacttctaaacttattttatagttattg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2127 ggaggagccgcgggtgaatttatatgttgagatacttctaaacttattttatagttattg 2068
Query: 179 tttatatttttagaaatagctaaatgaccttcagcttcgataaatcctacaatatattca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2067 tttatatttttagaaatagctaaatgaccttcagcttcgataaatcctacaatatattca 2008
Query: 239 atattaattttagaaataatatcatcatattccccgcscggctcgccctaccctacggta 298
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2007 atattaattttagaaataatatcatcatattccccgcgcggctcgccctaccctacggta 1948
Query: 299 gggcgatgccgcgcgggggggagtatggtttgaagaattagtatttaattcttcatttaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1947 gggcgatgccgcgcgggggggagtatggtttgaagaattagtatttaattcttcatttaa 1888
Query: 359 tttattacataattctaatttaatatttttagaaattgtagaatcactagtagataattt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1887 tttattacataattctaatttaatatttttagaaattgtagaatcactagtagataattt 1828
Query: 419 atatatyaabmatabbccccgcggctactttcaatactggaggtagccgcggggtttgtt 478
|||||| || ||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1827 atatattaataatattcnccgcggctactttcaatactggaggtagccgcggggtttgtt 1768
Query: 479 tatattataatcctgcgcgacatcacccaaccctagggttgggtga 524
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1767 tatattataatcctgcgcgacatcacccaaccctagggttgggtga 1722
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4563
Number of Sequences: 1807
Number of extensions: 4563
Number of successful extensions: 126
Number of sequences better than 1.0e-20: 1
length of query: 527
length of database: 10,358,551
effective HSP length: 16
effective length of query: 511
effective length of database: 10,329,639
effective search space: 5278445529
effective search space used: 5278445529
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)